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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs7032019 chr9:100548144 G/A CLDN2 chrX:106143394-106174091:+ 0.26 6.06 2.81E-9 Box Plot
THCA rs7032019 chr9:100548144 G/A EML5 chr14:89078775-89259096:- 0.3 6.86 2.11E-11 Box Plot
THCA rs7032019 chr9:100548144 G/A EPDR1 chr7:37723446-37991543:+ 0.32 7.11 4.19E-12 Box Plot
THCA rs7032019 chr9:100548144 G/A GGT5 chr22:24615622-24641110:- 0.26 5.94 5.54E-9 Box Plot
THCA rs7032019 chr9:100548144 G/A LRRC42 chr1:54411750-54433841:+ -0.23 -6.05 2.94E-9 Box Plot
THCA rs7032019 chr9:100548144 G/A NKX6-1 chr4:85413140-85419603:- 0.5 8.83 2.07E-17 Box Plot
THCA rs7032019 chr9:100548144 G/A PLCE1 chr10:95790569-96092580:+ 0.27 6.13 1.81E-9 Box Plot
THCA rs7032086 chr9:100656402 T/G NKX6-1 chr4:85413140-85419603:- 0.36 5.91 6.37E-9 Box Plot
THCA rs7032114 chr9:100656459 T/G FAM81A chr15:59664892-59815748:+ -0.25 -5.9 6.92E-9 Box Plot
THCA rs7033765 chr9:100591705 A/T NKX6-1 chr4:85413140-85419603:- -0.35 -5.92 6.19E-9 Box Plot
THCA rs7034249 chr9:100653821 C/T FAM81A chr15:59664892-59815748:+ -0.26 -6.02 3.51E-9 Box Plot
THCA rs7034310 chr9:100527157 A/G DHCR7 chr11:71139239-71163914:- 0.28 6.1 2.22E-9 Box Plot
THCA rs7034336 chr9:100661100 C/T FAM81A chr15:59664892-59815748:+ -0.25 -6.01 3.68E-9 Box Plot
THCA rs7034648 chr9:100654093 C/A FAM81A chr15:59664892-59815748:+ -0.26 -6.02 3.51E-9 Box Plot
THCA rs7037324 chr9:100658318 A/G FAM81A chr15:59664892-59815748:+ -0.25 -5.88 7.78E-9 Box Plot